A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling

Ali Kishk; Asmaa Elzizy; Dina Galal; Elham Abdel Razek; Esraa Fawzy; Gehad Ahmed; Mohamed Gawish; Safwat Hamad; Mohamed El-Hadidi

doi:10.1109/CIBEC.2018.8641805

A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling

Ali Kishk
, Asmaa Elzizy
, Dina Galal
, Elham Abdel Razek
, Esraa Fawzy
, Gehad Ahmed
, Mohamed Gawish
, Safwat Hamad
, Mohamed El-Hadidi

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Original language	English
Title of host publication	2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings
Editors	Ayman Eldeib, Tamer Basha, Inas Yassine
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	118-121
Number of pages	4
ISBN (Electronic)	9781538681541
DOIs	https://doi.org/10.1109/CIBEC.2018.8641805
State	Published - Jul 2 2018
Externally published	Yes
Event	9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Cairo, Egypt Duration: Dec 20 2018 → Dec 22 2018

Publication series

Name	2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings

Conference

Conference	9th Cairo International Biomedical Engineering Conference, CIBEC 2018
Country/Territory	Egypt
City	Cairo
Period	12/20/18 → 12/22/18

ASJC Scopus Subject Areas

Safety, Risk, Reliability and Quality
Computer Science Applications
Computer Vision and Pattern Recognition
Biomedical Engineering

Keywords

Colorectal cancer
Metagenomics
Phenotype classification

Access to Document

10.1109/CIBEC.2018.8641805

Cite this

Kishk, A., Elzizy, A., Galal, D., Razek, E. A., Fawzy, E., Ahmed, G., Gawish, M., Hamad, S., & El-Hadidi, M. (2018). A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling. In A. Eldeib, T. Basha, & I. Yassine (Eds.), 2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings (pp. 118-121). Article 8641805 (2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/CIBEC.2018.8641805

Kishk, Ali et al. "A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling." 2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings, edited by Ayman Eldeib, Tamer Basha and Inas Yassine, 2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings., Institute of Electrical and Electronics Engineers Inc., 2018, 118-121 https://doi.org/10.1109/CIBEC.2018.8641805

A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling. / Kishk, Ali; Elzizy, Asmaa; Galal, Dina et al.
2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings. ed. / Ayman Eldeib; Tamer Basha; Inas Yassine. Institute of Electrical and Electronics Engineers Inc., 2018. p. 118-121 8641805 (2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Kishk, A, Elzizy, A, Galal, D, Razek, EA, Fawzy, E, Ahmed, G, Gawish, M, Hamad, S & El-Hadidi, M 2018, A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling. in A Eldeib, T Basha & I Yassine (eds), 2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings., 8641805, 2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings, Institute of Electrical and Electronics Engineers Inc., pp. 118-121, 9th Cairo International Biomedical Engineering Conference, CIBEC 2018, Cairo, Egypt, 12/20/18. https://doi.org/10.1109/CIBEC.2018.8641805

Kishk A, Elzizy A, Galal D, Razek EA, Fawzy E, Ahmed G et al. A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling. In Eldeib A, Basha T, Yassine I, editors, 2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc. 2018. p. 118-121. 8641805. (2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings). doi: 10.1109/CIBEC.2018.8641805

Kishk, Ali ; Elzizy, Asmaa ; Galal, Dina et al. / A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling. 2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings. editor / Ayman Eldeib ; Tamer Basha ; Inas Yassine. Institute of Electrical and Electronics Engineers Inc., 2018. pp. 118-121 (2018 9th Cairo International Biomedical Engineering Conference, CIBEC 2018 - Proceedings).

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title = "A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling",

keywords = "Colorectal cancer, Metagenomics, Phenotype classification",

author = "Ali Kishk and Asmaa Elzizy and Dina Galal and Razek, \{Elham Abdel\} and Esraa Fawzy and Gehad Ahmed and Mohamed Gawish and Safwat Hamad and Mohamed El-Hadidi",

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AU - Razek, Elham Abdel

AU - Fawzy, Esraa

AU - Ahmed, Gehad

AU - Gawish, Mohamed

AU - Hamad, Safwat

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A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling

Publication series

Conference

ASJC Scopus Subject Areas

Keywords

Access to Document

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